Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015953542.1_cds_XP_016492644.1_82828
CDS Infomation

[gene=LOC107812127] [db_xref=GeneID:107812127] [protein=PTI1-like tyrosine-protein kinase 1 isoform X2] [protein_id=XP_016492644.1] [location=complement(join(10815..10940,11170..11253,11361..11493,14134..14407,14509..14635,14730..14983,18316..18409))] [gbkey=CDS]
Sequence

ATGAGAAAGTGGCTCTGCTGCACCTGCCAAGTAGAGGAGTCTGACCCATCGCATGAAAAC
GAGCTCCACAAAAGCCCCAAGAACAATTTTGATGGATATCAGAAAGGGTCAAAAGCATCA
GTTCCTGCCAAGGCTGAAGTGCAAAAAGCAATACCAACTATAGAGGTCCCTGCATTGTCT
TTGGATGAACTGAAAGAGGAAACTGACAATTTTGGATCGAAGGCATTAATTGGTGAAGGA
TCTTACGGAAGAGTATACTATGCTAATCTAAACAATGGCAAAGCCGTGGCTGTAAAAAAG
CTTGATGTTTCATCTGAGCCTGAGACTAATGTTGACTTCCTGAGCCAGGTCTCTATGGTT
TCAAGATTGAAGCATGTAAATCTGGTTGATTTGCTTGGTTACTGTGTGGAAGGGAACCTT
CGTGTATTAGCTTATGAGTTCGCAACAATGGGTTCCTTGCATGATATTCTGCATGGCAGG
AAAGGAGTACAAGGAGCACAACCTGGACCTACACTTGATTGGATGCAACGGGTAAAAATT
GCTGTTGATGCTGCAAGGGGCCTTGAGTATTTGCATGAGAAGGTCCAGCCTCCAATAATA
CACAGGGATATCAGATCAAGCAATGTCCTTCTCTTTGAAGACTACAAAGCAAAAATTGCT
GATTTTAATCTGTCAAATCAGTCTCCTGACATGGCTGCTCGCCTTCATTCTACACGAGTT
TTGGGAACATTTGGTTATCATGCACCAGAATATGCAATGACAGGACAATTGACACAAAAG
AGTGATGTGTATAGCTTTGGGGTGGTTCTTCTTGAACTTTTGACAGGAAGAAAACCTGTA
GATCATACGATGCCTCGTGGACAACAGAGTTTGGTTACTTGGGCTACTCCGAGACTAAGT
GAAGATAAGGTTAAGCAATGCGTCGATCCAAAGCTGAAAGACGTTCCTGCAAAAGGAGTT
GCTAAGTTGGCAGCTGTTGCAGCGCTGTGCGTGCAATATGAGGCTGAGTTCCGCCCTAAT
ATGAGTATTGTTGTCAAAGCTCTTCAACCACTGTTAAAGGCACCTGTTCCTGCTCCTGCT
CCCGAGTCATAG

Peptide Sequence

PEP ID

XP_016492644.1
PEP Infomation

PREDICTED: PTI1-like tyrosine-protein kinase 1 isoform X2 [Nicotiana tabacum]
Sequence

MRKWLCCTCQVEESDPSHENELHKSPKNNFDGYQKGSKASVPAKAEVQKAIPTIEVPALS
LDELKEETDNFGSKALIGEGSYGRVYYANLNNGKAVAVKKLDVSSEPETNVDFLSQVSMV
SRLKHVNLVDLLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPTLDWMQRVKI
AVDAARGLEYLHEKVQPPIIHRDIRSSNVLLFEDYKAKIADFNLSNQSPDMAARLHSTRV
LGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLVTWATPRLS
EDKVKQCVDPKLKDVPAKGVAKLAAVAALCVQYEAEFRPNMSIVVKALQPLLKAPVPAPA
PES

Transcript Sequence

Gene sequence data has not been registered.